chr1 : 230,882,687 230,883,179
492 bp 18 TFs 5 linked genes
This 492 bp open chromatin element is linked to 5 target genes and is bound by 18 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
C1orf198 14.5 kb Distal Multiome
TTC13 95.9 kb Distal Multiome
ARV1 96.1 kb Distal Multiome
FAM89A 157.3 kb Distal Multiome
COG2 240.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:230,877,687 – 230,888,179
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 122 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF956TPS 118 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 360 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 124 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 283 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 54 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 326 bp overlap
ChIP DE DE-GATA4-2 364 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 370 bp overlap
ChIP DE DE-GATA6-2 331 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 330 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 346 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 339 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 261 bp overlap
LCOR 1 dataset
ChIP K562 ENCFF340MHH 187 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 157 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 119 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 348 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 282 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 341 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 454 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 424 bp overlap
ZBTB7A 2 datasets
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 109 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 72 bp overlap