chr13 : 84,812,052 – 84,812,369
317 bp 20 TFs 0 linked genes
This 317 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:84,807,052 – 84,817,369
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.AR.LNCaP_FENG_shFOXA1_Ethanol 153 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 188 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 103 bp overlap
CTCF 52 datasets
ChIP 81-3 ERP002246.CTCF.81-3 100 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 194 bp overlap
ChIP BE2C ENCFF757SRF 232 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 169 bp overlap
ChIP GM23338 ENCFF772DML 96 bp overlap
ChIP H1 ENCFF764RHO 190 bp overlap
ChIP H9 ENCFF152GTF 293 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 211 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 162 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 195 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 228 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 161 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 171 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 194 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 260 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 54 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 240 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 174 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 155 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 150 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 84 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 150 bp overlap
ChIP Loucy ENCFF359TVQ 271 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 205 bp overlap
ChIP MCF-7 ENCFF198DQX 172 bp overlap
ChIP MCF-7 ENCFF494VXA 172 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 134 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 129 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 188 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 161 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 147 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 100 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 175 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 115 bp overlap
ChIP endodermal cell ENCFF471YCZ 288 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 143 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 132 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 184 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 162 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 158 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 171 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 126 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 207 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 140 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 181 bp overlap
ChIP islet ERP004003.CTCF.islet 127 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 121 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 178 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 178 bp overlap
ChIP neural progenitor cell ENCFF420RBO 134 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 181 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 177 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 216 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 123 bp overlap
ChIP neural cell ENCFF442QNK 212 bp overlap
ESR1 3 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 158 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 154 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 110 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 199 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 207 bp overlap
JUNB 2 datasets
ChIP GM23338 ENCFF224LRO 288 bp overlap
ChIP hESC ENCSR917MAH.JUNB.hESC 201 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 204 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 187 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 207 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 98 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 287 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 97 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 140 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 134 bp overlap
RAD21 28 datasets
ChIP H1 ENCFF698EWO 95 bp overlap
ChIP H1 ENCFF967OJF 206 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 221 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 202 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 198 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 144 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 107 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 107 bp overlap
ChIP Ishikawa ENCFF570JVV 190 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 130 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 237 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 162 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 120 bp overlap
ChIP SK-N-SH ENCFF747MAS 210 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 155 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 227 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 239 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 242 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 203 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 150 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 222 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 193 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 246 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 198 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 234 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 221 bp overlap
ChIP neural cell ENCFF564MOT 317 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 212 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 212 bp overlap
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