Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

28 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 273 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 219 bp overlap

E2F7 1 dataset

Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 312 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 491 bp overlap

ChIP DE DE-FOXA2-2 500 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 521 bp overlap

ChIP DE DE-GATA4-2 510 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 497 bp overlap

ChIP DE DE-GATA6-2 479 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 424 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 498 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 439 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 521 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 486 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 406 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 381 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

JUN 1 dataset

ChIP DE_D1 S40-DE-d1-JUN-exp2 268 bp overlap

NANOG 6 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 211 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 433 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 264 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 311 bp overlap

ChIP hESC GSE18292.NANOG.hESC 50 bp overlap

NEUROD1 1 dataset

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

ONECUT2 1 dataset

ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 173 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU5F1 2 datasets

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 251 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 269 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 267 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 496 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 278 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 300 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 305 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 366 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 471 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 182 bp overlap

Genome Browser