chr13 : 80,355,788 – 80,356,227
439 bp 28 TFs 0 linked genes
This 439 bp open chromatin element has no linked target genes and is bound by 28 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:80,350,788 – 80,361,227
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
CTCF 48 datasets
ChIP 22Rv1 ENCFF466OXN 439 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 223 bp overlap
ChIP A673 ENCFF123WOM 232 bp overlap
ChIP BJ ENCFF434HEC 295 bp overlap
ChIP C4-2B ENCFF821XVN 439 bp overlap
ChIP C4-2B ENCFF821XVN 439 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND-41 ENCFF913MRA 317 bp overlap
ChIP GM12874 ENCFF942MTD 261 bp overlap
ChIP GM23338 ENCFF531QOI 271 bp overlap
ChIP GM23338 ENCFF772DML 184 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 143 bp overlap
ChIP H9 ENCFF152GTF 308 bp overlap
ChIP HCT116 ENCFF003KHP 386 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HFFc6 ENCFF005CJI 439 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 218 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 122 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 179 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP Loucy ENCFF359TVQ 425 bp overlap
ChIP Loucy ENCFF359TVQ 276 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 355 bp overlap
ChIP PC-3 ENCFF487TUI 388 bp overlap
ChIP VCaP ENCFF858YQT 435 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WTC11 ENCFF658QVH 420 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 261 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 277 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 174 bp overlap
ChIP endodermal cell ENCFF471YCZ 429 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 247 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 215 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 168 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 124 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 179 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 185 bp overlap
ChIP keratinocyte ENCFF667ULX 308 bp overlap
ChIP osteoblast ENCFF491ZJZ 388 bp overlap
ChIP placenta ENCFF029PHY 402 bp overlap
ChIP thyroid gland ENCFF300RYK 346 bp overlap
EBF3 2 datasets
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap
Ebf2 2 datasets
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
GLI3 2 datasets
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
Gli1 2 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 439 bp overlap
NFYB 2 datasets
ChIP HepG2 ENCFF174VYX 118 bp overlap
ChIP WTC11 ENCFF751ZTQ 313 bp overlap
NFYC 1 dataset
ChIP HepG2 ENCFF836FYP 333 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 254 bp overlap
RAD21 11 datasets
ChIP A549 ENCFF047SFC 251 bp overlap
ChIP H1 ENCFF698EWO 162 bp overlap
ChIP H1 ENCFF967OJF 82 bp overlap
ChIP HCT116 ENCFF568PEO 311 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 90 bp overlap
ChIP HepG2 ENCFF916QGM 344 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 150 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 240 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 265 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 201 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 172 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF843EBZ 119 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 180 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 104 bp overlap
ZBTB7B 2 datasets
Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap
Motif ES_0h ES_0h-ZBTB7B_MA0694.2 10 bp overlap
ZBTB7C 2 datasets
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
Motif ES_0h ES_0h-ZBTB7C_MA0695.2 8 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF449 2 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 439 bp overlap
Zfp335 3 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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