chr12 : 85,274,190 85,274,408
218 bp 16 TFs 1 linked gene
This 218 bp open chromatin element is linked to ALX1 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ALX1 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:85,269,190 – 85,279,408
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
EZH2 14 datasets
ChIP GM23338 ENCFF613YON 154 bp overlap
ChIP GM23338 ENCFF613YON 148 bp overlap
ChIP GM23338 ENCFF886DXX 175 bp overlap
ChIP H1 ENCFF232NZA 218 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 127 bp overlap
ChIP astrocyte ENCFF365JTP 218 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 218 bp overlap
ChIP hepatocyte ENCFF552DZB 55 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 114 bp overlap
ChIP keratinocyte ENCFF070STK 218 bp overlap
ChIP keratinocyte ENCFF070STK 218 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 162 bp overlap
ChIP neural progenitor cell ENCFF018MKA 218 bp overlap
ChIP neural progenitor cell ENCFF472NFV 218 bp overlap
JARID2 4 datasets
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 175 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 101 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 103 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 218 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 86 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 218 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 155 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 93 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 123 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 189 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 73 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 194 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 126 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 218 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 218 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 60 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 218 bp overlap
ChIP H1 ENCFF881NFR 218 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 218 bp overlap
TCF7L2 2 datasets
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 93 bp overlap
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 58 bp overlap