chr1 : 209,268,085 209,268,774
689 bp 30 TFs 1 linked gene
This 689 bp open chromatin element is linked to ATP5MC2P1 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ATP5MC2P1 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:209,263,085 – 209,273,774
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AR 3 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 146 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 97 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 175 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 160 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 195 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 79 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 396 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 93 bp overlap
ESR1 9 datasets
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 231 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 173 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 204 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 153 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 144 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 198 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 199 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 54 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 109 bp overlap
FOXA1 17 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 163 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 212 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 51 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 54 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 202 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 125 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 202 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 303 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 247 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 106 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 93 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 109 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 203 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 91 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 61 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 99 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 129 bp overlap
FOXA2 6 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 229 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 267 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 303 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 204 bp overlap
ChIP DE DE-FOXA2-1 689 bp overlap
ChIP DE DE-FOXA2-2 672 bp overlap
GATA2 3 datasets
ChIP endothelial cell of umbilical vein ENCFF148NLK 125 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 135 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 185 bp overlap
ChIP DE DE-GATA4-1 689 bp overlap
ChIP DE DE-GATA4-2 689 bp overlap
ChIP foregut GSE117136.GATA4.foregut 594 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 585 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 236 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 393 bp overlap
ChIP DE DE-GATA6-1 689 bp overlap
ChIP DE DE-GATA6-2 689 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 479 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 689 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 416 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 627 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 689 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 560 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 561 bp overlap
ChIP foregut GSE117136.GATA6.foregut 689 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 335 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 524 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 456 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 171 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 130 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 203 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 433 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 265 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 119 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 377 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 108 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 370 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 555 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 269 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 577 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 577 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 118 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 238 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 167 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 668 bp overlap