chr12 : 44,465,214 – 44,465,521
307 bp 20 TFs 0 linked genes
This 307 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:44,460,214 – 44,470,521
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 170 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 172 bp overlap
CTCF 340 datasets
ChIP 22Rv1 ENCFF466OXN 238 bp overlap
ChIP 22Rv1 ENCFF466OXN 303 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 307 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 307 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 285 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 100 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 307 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 286 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 210 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 292 bp overlap
ChIP A549 ENCFF034FVO 298 bp overlap
ChIP A549 ENCFF669BWC 307 bp overlap
ChIP A673 ENCFF123WOM 307 bp overlap
ChIP AG04450 ENCFF116DJL 217 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 191 bp overlap
ChIP BE2C ENCFF757SRF 291 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 162 bp overlap
ChIP BJ ENCFF434HEC 246 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 215 bp overlap
ChIP C4-2B ENCFF821XVN 307 bp overlap
ChIP C4-2B ENCFF821XVN 215 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 289 bp overlap
ChIP Caco-2 ENCFF753NZV 307 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 177 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 134 bp overlap
ChIP D721Med ENCFF513FYD 211 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 151 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 254 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 307 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 307 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 216 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 256 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 223 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 248 bp overlap
ChIP GM06990 ENCFF471OQT 285 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 171 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 227 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 307 bp overlap
ChIP GM12864 ENCFF357DQE 233 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 146 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 100 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 133 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 135 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 99 bp overlap
ChIP GM12872 ENCFF697BYI 280 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 176 bp overlap
ChIP GM12878 ENCFF217EAX 307 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 307 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 100 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 126 bp overlap
ChIP GM23338 ENCFF531QOI 307 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 307 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 235 bp overlap
ChIP H9 ENCFF152GTF 231 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 307 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 307 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 267 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 232 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 255 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 270 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 307 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 307 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 283 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 307 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 273 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 293 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 307 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 241 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 178 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 226 bp overlap
ChIP HCT116 ENCFF003KHP 307 bp overlap
ChIP HCT116 ENCFF209YMI 271 bp overlap
ChIP HCT116 ENCFF373YMA 307 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 156 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 169 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 118 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 154 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 163 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 161 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 127 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 250 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 307 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 138 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 88 bp overlap
ChIP HEK293 ENCFF498RMM 248 bp overlap
ChIP HEK293 ENCFF821TIC 307 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 286 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 155 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 130 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 307 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 259 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 124 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 270 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 274 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 277 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 277 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 282 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 249 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 289 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 307 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 307 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 230 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 307 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 140 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 148 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 264 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 282 bp overlap
ChIP HeLa-S3_synchro GSE108173.CTCF.HeLa-S3_synchro 176 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 270 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 209 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 302 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 241 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 208 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 199 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 205 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 222 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 178 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 127 bp overlap
ChIP HepG2 ENCFF127KUP 210 bp overlap
ChIP HepG2 ENCFF194VBQ 253 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 293 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 307 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 307 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 134 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 221 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 153 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 120 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 145 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 149 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 181 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 158 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 129 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 121 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 209 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 307 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 118 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 227 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 141 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 201 bp overlap
ChIP LNCAP ENCFF223HIG 135 bp overlap
ChIP LNCAP ENCFF700QXT 307 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 307 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 129 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 179 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 307 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 247 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 293 bp overlap
ChIP Loucy ENCFF359TVQ 117 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 295 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 255 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 246 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 239 bp overlap
ChIP MCF-7 ENCFF139NQI 250 bp overlap
ChIP MCF-7 ENCFF162GNE 243 bp overlap
ChIP MCF-7 ENCFF198DQX 112 bp overlap
ChIP MCF-7 ENCFF210JUZ 233 bp overlap
ChIP MCF-7 ENCFF494VXA 111 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 307 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 307 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 248 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 245 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 182 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 170 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 137 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 150 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 307 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 277 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 290 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 291 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 302 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 210 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 115 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 284 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 261 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 213 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 166 bp overlap
ChIP MCF-7_fulvestrant-resistant GSE118711.CTCF.MCF-7_fulvestrant-resistant 235 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 276 bp overlap
ChIP MM.1S ENCFF869JMQ 307 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 276 bp overlap
ChIP NB4 ENCFF155DNY 233 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 198 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 257 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 206 bp overlap
ChIP NPC GSE115407.CTCF.NPC 238 bp overlap
ChIP OCI-LY1 ENCFF455ESK 118 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 307 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 228 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 307 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 260 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 307 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 242 bp overlap
ChIP PC-3 ENCFF487TUI 211 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 307 bp overlap
ChIP PC-9 ENCFF539ULB 296 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 307 bp overlap
ChIP SEM GSE117864.CTCF.SEM 119 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 157 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 252 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 307 bp overlap
ChIP SK-N-SH ENCFF575DMG 238 bp overlap
ChIP SK-N-SH ENCFF731NJX 242 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 298 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 174 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 189 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 130 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 307 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 307 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 307 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 233 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 136 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 307 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 237 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 151 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 307 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 301 bp overlap
ChIP T-47D_NaCl-30min GSE111923.CTCF.T-47D_NaCl-30min 255 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 306 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 307 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 282 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 258 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 258 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 307 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 287 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 270 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 242 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 293 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 256 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 307 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 307 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 215 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 262 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 213 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 229 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 139 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 203 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 190 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 204 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 185 bp overlap
ChIP VCaP ENCFF858YQT 307 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 307 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 216 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 226 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 257 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 214 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 202 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 186 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 307 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 202 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 202 bp overlap
ChIP brain ENCFF163BBN 149 bp overlap
ChIP brain ENCFF685VRG 307 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 235 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 179 bp overlap
ChIP chondrocyte ENCFF134ORZ 302 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 307 bp overlap
ChIP endodermal cell ENCFF471YCZ 264 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 197 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 123 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 221 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 307 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 145 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 194 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 147 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 299 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 222 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 207 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 167 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 262 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 135 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 163 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 111 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 297 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 176 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 214 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 236 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 290 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 307 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 307 bp overlap
ChIP hepatocyte ENCFF263BLJ 297 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 258 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 162 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 225 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 162 bp overlap
ChIP islet ERP004003.CTCF.islet 205 bp overlap
ChIP keratinocyte ENCFF667ULX 250 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 301 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 227 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 164 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 241 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 199 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 291 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 307 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 235 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 235 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 139 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 145 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 258 bp overlap
ChIP nephron ENCFF589HXU 307 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 307 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 293 bp overlap
ChIP neural crest cell ENCFF182LWK 307 bp overlap
ChIP neural progenitor cell ENCFF420RBO 199 bp overlap
ChIP neural progenitor cell ENCFF581WPG 307 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 265 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 245 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 194 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 144 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 200 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 219 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 156 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 229 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 264 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 307 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 307 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 236 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 244 bp overlap
ChIP right atrium auricular region ENCFF696NTN 307 bp overlap
ChIP smooth muscle cell ENCFF656FBT 293 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 186 bp overlap
ChIP thyroid gland ENCFF204HWS 307 bp overlap
ChIP thyroid gland ENCFF300RYK 307 bp overlap
ChIP thyroid gland ENCFF631QRY 240 bp overlap
ChIP thyroid gland ENCFF748ICQ 274 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 307 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 307 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 302 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 249 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 307 bp overlap
CTCFL 3 datasets
ChIP FT282 GSE131931.CTCFL.FT282 307 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 192 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 189 bp overlap
ERG 1 dataset
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 130 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 264 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 300 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 297 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 304 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 292 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 285 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 269 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 258 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 277 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 280 bp overlap
FOXA1 1 dataset
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 208 bp overlap
GATA6 4 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 166 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 180 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 179 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 274 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
RAD21 45 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 142 bp overlap
ChIP A549 ENCFF047SFC 251 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 135 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 307 bp overlap
ChIP H1 ENCFF698EWO 221 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 307 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 307 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 279 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 243 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 307 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 205 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 215 bp overlap
ChIP HCT116 ENCFF568PEO 274 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 151 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.RAD21.HEC-1-B_FFRR-insertion 168 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 208 bp overlap
ChIP HeLa-S3 ENCFF775CHI 231 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 182 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 307 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 86 bp overlap
ChIP MCF-7 ENCFF694KOM 108 bp overlap
ChIP MCF-7 ENCFF724VCQ 257 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 298 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 303 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 265 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 252 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 176 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 156 bp overlap
ChIP SK-N-SH ENCFF747MAS 226 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 173 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 307 bp overlap
ChIP T-47D GSE111923.RAD21.T-47D 273 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 303 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 184 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 212 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 181 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 202 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 237 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 175 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 208 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 273 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 170 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 307 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 238 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 307 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 211 bp overlap
SMC1 5 datasets
ChIP DKO GSE131606.SMC1.DKO 283 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 307 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 219 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 261 bp overlap
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 143 bp overlap
SMC1A 5 datasets
ChIP A-549 GSE76893.SMC1A.A-549 200 bp overlap
ChIP HCT-116 GSE112000.SMC1A.HCT-116 219 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 232 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 218 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 276 bp overlap
SMC3 15 datasets
ChIP GP5D GSE51234.SMC3.GP5D 307 bp overlap
ChIP GP5D_SIRAD21 GSE51234.SMC3.GP5D_SIRAD21 284 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 245 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 245 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 245 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 307 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 298 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 158 bp overlap
ChIP HeLa-S3 ENCFF992MML 243 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 117 bp overlap
ChIP HeLa_ESCO2-deltaPBMA_ctrl_siRNA GSE105004.SMC3.HeLa_ESCO2-deltaPBMA_ctrl_siRNA 199 bp overlap
ChIP SK-N-SH ENCFF791WFB 223 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 191 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 288 bp overlap
ChIP neural cell ENCFF795YGY 307 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 286 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 138 bp overlap
STAG1 5 datasets
ChIP HeLa GSE126990.STAG1.HeLa 307 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 307 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 283 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 201 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 222 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 121 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 184 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 298 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 226 bp overlap
Huangfu Lab · Publications · Resources · Contact