chr12 : 31,962,116 31,962,481
365 bp 33 TFs 2 linked genes
This 365 bp open chromatin element is linked to RESF1 and LINC02422 and is bound by 33 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RESF1 2.7 kb Proximal Proximity
LINC02422 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:31,957,116 – 31,967,481
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 260 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 222 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCFF521IZR 207 bp overlap
BRD4 5 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 365 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 135 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 229 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 64 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 86 bp overlap
ESR1 34 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 158 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 146 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 333 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 365 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 233 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 365 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 201 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 258 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 139 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 147 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 365 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 365 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 246 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 107 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 194 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 187 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 308 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 297 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 248 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 247 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 270 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 249 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 226 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 236 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 220 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 119 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 195 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 148 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 132 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 101 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 88 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 167 bp overlap
ChIP MCF-7_estrogen GSE133941.ESR1.MCF-7_estrogen 200 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 207 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 151 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 89 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 91 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 178 bp overlap
FOXA1 1 dataset
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 151 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 241 bp overlap
ChIP DE DE-FOXA2-1 365 bp overlap
ChIP DE DE-FOXA2-2 365 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 131 bp overlap
GATA4 8 datasets
ChIP A-549 GSE85002.GATA4.A-549 295 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 365 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 361 bp overlap
ChIP foregut GSE117136.GATA4.foregut 365 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 304 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 260 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 286 bp overlap
ChIP DE DE-GATA6-1 365 bp overlap
ChIP DE DE-GATA6-2 365 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 261 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 356 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 295 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 251 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 326 bp overlap
ChIP foregut GSE117136.GATA6.foregut 365 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 343 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 365 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 264 bp overlap
HNF1A 2 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 227 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 169 bp overlap
HNF1B 2 datasets
ChIP PDAC GSE64557.HNF1B.PDAC 365 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 325 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 103 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 233 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 102 bp overlap
MED1 1 dataset
ChIP MOLM-14 GSE65138.MED1.MOLM-14 161 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 242 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 182 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 365 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 205 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 365 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 207 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 180 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 245 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 163 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 365 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 285 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 273 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 365 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 217 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 320 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 123 bp overlap
ZNF384 2 datasets
ChIP K-562 ENCSR000EFP.ZNF384.K-562 247 bp overlap
ChIP K562 ENCFF365NXQ 297 bp overlap