chr12 : 20,181,821 20,182,532
711 bp 48 TFs 0 linked genes
This 711 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:20,176,821 – 20,187,532
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 251 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 250 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 342 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 233 bp overlap
ChIP DE DE-FOXA2-1 696 bp overlap
ChIP DE DE-FOXA2-2 365 bp overlap
ChIP DE DE-FOXA2-2 246 bp overlap
GATA4 7 datasets
ChIP A-549 GSE85002.GATA4.A-549 223 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 246 bp overlap
ChIP DE DE-GATA4-1 711 bp overlap
ChIP DE DE-GATA4-2 711 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 651 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 711 bp overlap
GATA6 12 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 265 bp overlap
ChIP DE DE-GATA6-1 711 bp overlap
ChIP DE DE-GATA6-2 711 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 316 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 711 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 377 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 331 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 377 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 711 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 363 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 277 bp overlap
GFI1 1 dataset
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gfi1B 2 datasets
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HOXC12 1 dataset
Motif DE_60h DE_60h-HOXC12_MA0906.2 10 bp overlap
HOXD11 1 dataset
Motif DE_60h DE_60h-HOXD11_MA0908.2 9 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap
MSC 1 dataset
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MYF5 1 dataset
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PBX2 1 dataset
Motif DE_60h DE_60h-PBX2_MA1113.3 9 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 317 bp overlap
PKNOX2 1 dataset
Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 300 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TBX20 1 dataset
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TFAP4 1 dataset
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
TGIF1 1 dataset
Motif DE_60h DE_60h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_60h DE_60h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_60h DE_60h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_60h DE_60h-TGIF2LY_MA1572.1 12 bp overlap
TP63 1 dataset
Motif DE_60h DE_60h-TP63_MA0525.2 18 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_60h DE_60h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
ZBTB32 2 datasets
Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap
Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap
ZSCAN4 1 dataset
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap