chr1 : 22,443,217 22,443,731
514 bp 29 TFs 2 linked genes
This 514 bp open chromatin element is linked to ZBTB40 and EPHB2 and is bound by 29 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ZBTB40 8.1 kb Proximal Proximity
EPHB2 267.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:22,438,217 – 22,448,731
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 302 bp overlap
ChIP K562 ENCFF673OEZ 183 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 476 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 326 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 440 bp overlap
ChIP DE DE-FOXA2-2 270 bp overlap
GATA1 2 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 126 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 175 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 437 bp overlap
ChIP DE DE-GATA4-2 514 bp overlap
ChIP foregut GSE117136.GATA4.foregut 330 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 420 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 371 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 458 bp overlap
ChIP DE DE-GATA6-2 514 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 514 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 514 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 514 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 436 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 514 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 514 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 415 bp overlap
ChIP foregut GSE117136.GATA6.foregut 273 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 273 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 402 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 514 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 514 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 514 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 514 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 438 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 451 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 468 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 441 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 514 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP H1 ENCFF010YXS 216 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 285 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 260 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 299 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 395 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 266 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 514 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 496 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 424 bp overlap
ChIP hESC GSE18292.NANOG.hESC 195 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 188 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 224 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 342 bp overlap
POU5F1 6 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 346 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 390 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 514 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 389 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 206 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 375 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 445 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 514 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 442 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 345 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 420 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 412 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 455 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 413 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 139 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 268 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 162 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 237 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 391 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 295 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 202 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 175 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 282 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 145 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 239 bp overlap