chr11 : 90,459,804 – 90,460,079
275 bp 23 TFs 0 linked genes
This 275 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:90,454,804 – 90,465,079
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
CTCF 70 datasets
ChIP 22Rv1 ENCFF466OXN 96 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 96 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 95 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 83 bp overlap
ChIP A549 ENCFF669BWC 56 bp overlap
ChIP B cell ENCFF500PZO 151 bp overlap
ChIP C4-2B ENCFF821XVN 237 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 98 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 156 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 88 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 78 bp overlap
ChIP GM23338 ENCFF832KWE 88 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 200 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 52 bp overlap
ChIP PC-9 ENCFF539ULB 53 bp overlap
ChIP Panc1 ENCFF056JQX 50 bp overlap
ChIP Panc1 ENCFF056JQX 67 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 85 bp overlap
ChIP RWPE2 ENCFF911IEE 161 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 129 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 68 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 162 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 64 bp overlap
ChIP VCaP ENCFF858YQT 155 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 116 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 105 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 275 bp overlap
ChIP body of pancreas ENCFF128ALM 61 bp overlap
ChIP brain ENCFF099ASU 246 bp overlap
ChIP brain ENCFF163BBN 75 bp overlap
ChIP brain ENCFF163BBN 128 bp overlap
ChIP brain ENCFF685VRG 275 bp overlap
ChIP chondrocyte ENCFF134ORZ 177 bp overlap
ChIP colonic mucosa ENCFF319RUN 126 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF092NXX 99 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF230SFD 57 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 65 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF749FBO 67 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 78 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF851XUX 51 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 147 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 152 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 78 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 216 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 164 bp overlap
ChIP heart left ventricle ENCFF832OXT 66 bp overlap
ChIP heart right ventricle ENCFF022KFI 53 bp overlap
ChIP heart right ventricle ENCFF163IJK 93 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 189 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 76 bp overlap
ChIP lower lobe of left lung ENCFF150FXW 98 bp overlap
ChIP lower lobe of left lung ENCFF906NCV 54 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 118 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 244 bp overlap
ChIP nephron ENCFF411ACD 61 bp overlap
ChIP pancreas ENCFF372XNU 55 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 75 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 234 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 109 bp overlap
ChIP right atrium auricular region ENCFF471FFM 50 bp overlap
ChIP sigmoid colon ENCFF397ZZF 109 bp overlap
ChIP spleen ENCFF065CBS 88 bp overlap
ChIP spleen ENCFF065CBS 275 bp overlap
ChIP spleen ENCFF326DUY 96 bp overlap
ChIP spleen ENCFF520HPZ 66 bp overlap
ChIP spleen ENCFF954DQD 87 bp overlap
ChIP stomach ENCFF767CVC 60 bp overlap
ChIP stomach ENCFF918GTC 67 bp overlap
ChIP thyroid gland ENCFF877DRR 88 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 69 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 141 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 203 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 131 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RORB 1 dataset
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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