Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

19 transcription factors

CEBPA 1 dataset

ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 104 bp overlap

CTCF 1 dataset

ChIP neural ENCSR822CEA.CTCF.neural 148 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 444 bp overlap

ChIP hESC GSE26097.EOMES.hESC 264 bp overlap

FOXA2 2 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 203 bp overlap

ChIP DE DE-FOXA2-2 552 bp overlap

GATA2 1 dataset

ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 279 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 816 bp overlap

ChIP DE DE-GATA4-2 840 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 485 bp overlap

ChIP DE DE-GATA6-2 840 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 840 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 840 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 840 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 840 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 840 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 840 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 370 bp overlap

HIF1A 1 dataset

ChIP MDA-MB-231 GSE108833.HIF1A.MDA-MB-231 185 bp overlap

JUN 2 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 306 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 316 bp overlap

PGR 1 dataset

ChIP T-47D_PG GSE68356.PGR.T-47D_PG 276 bp overlap

RAD21 1 dataset

ChIP neural ENCSR198ZYJ.RAD21.neural 220 bp overlap

RELA 1 dataset

ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 58 bp overlap

REST 1 dataset

ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 163 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 749 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 840 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 840 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 299 bp overlap

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 404 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 840 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 427 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 840 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 840 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 784 bp overlap

SMC3 1 dataset

ChIP neural ENCSR404BPV.SMC3.neural 111 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 276 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 399 bp overlap

Genome Browser