chr1 : 199,322,362 – 199,322,897
535 bp 17 TFs 0 linked genes
This 535 bp open chromatin element has no linked target genes and is bound by 17 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:199,317,362 – 199,327,897
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 79 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 334 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 248 bp overlap
ESR1 3 datasets
ChIP MCF-7 GSE68356.ESR1.MCF-7 191 bp overlap
ChIP MCF-7_TAMR GSE86538.ESR1.MCF-7_TAMR 229 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 294 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 205 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 226 bp overlap
HSF1 3 datasets
ChIP HCT-116_KOFBXW7 GSE57398.HSF1.HCT-116_KOFBXW7 231 bp overlap
ChIP MO91 GSE45852.HSF1.MO91 244 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 305 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 279 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 212 bp overlap
STAT3 7 datasets
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 196 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 235 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 189 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 195 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 413 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 372 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 295 bp overlap
ZNF496 1 dataset
ChIP HEK293T GSE78099.ZNF496.HEK293T 294 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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