chr11 : 21,323,780 – 21,323,910
130 bp 19 TFs 0 linked genes
This 130 bp open chromatin element has no linked target genes and is bound by 19 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:21,318,780 – 21,328,910
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
CTCF 181 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 124 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 130 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 130 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 130 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 130 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 130 bp overlap
ChIP A673 ENCFF123WOM 130 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 113 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 130 bp overlap
ChIP C4-2B ENCFF821XVN 130 bp overlap
ChIP Caco-2 ENCFF753NZV 130 bp overlap
ChIP Caco-2 ENCFF934QYS 84 bp overlap
ChIP DND-41 ENCFF913MRA 130 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 130 bp overlap
ChIP DOHH2 ENCFF637WNW 130 bp overlap
ChIP DOHH2 ENCFF637WNW 119 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 130 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 130 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 130 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 130 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 118 bp overlap
ChIP GM06990 ENCFF471OQT 130 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 130 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 130 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 130 bp overlap
ChIP GM12864 ENCFF357DQE 123 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 120 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 67 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 130 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 90 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 126 bp overlap
ChIP GM12872 ENCFF697BYI 130 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 130 bp overlap
ChIP GM12873 ENCFF711LOS 130 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 130 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 130 bp overlap
ChIP GM12878 ENCFF485TGR 130 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 130 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 122 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 121 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 108 bp overlap
ChIP GM13977 ENCFF528ESQ 130 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 106 bp overlap
ChIP GM23338 ENCFF531QOI 130 bp overlap
ChIP GM23338 ENCFF772DML 130 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 130 bp overlap
ChIP H1 ENCFF414GZI 130 bp overlap
ChIP H1 ENCFF764RHO 130 bp overlap
ChIP H9 ENCFF152GTF 130 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 130 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 130 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 130 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 130 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 130 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 130 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 130 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 130 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 130 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 130 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 130 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 130 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 130 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 130 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 87 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 130 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 130 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 130 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 130 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 130 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 130 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 88 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 116 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 116 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 100 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 130 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 130 bp overlap
ChIP Jurkat GSE130140.CTCF.Jurkat 130 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 105 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 127 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 96 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 115 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 122 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 130 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 130 bp overlap
ChIP KMS-11 ENCFF853JKX 130 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 108 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 130 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 121 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 130 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 130 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 130 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 130 bp overlap
ChIP MM.1S ENCFF869JMQ 130 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 130 bp overlap
ChIP NB4 ENCFF155DNY 130 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 130 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 130 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 130 bp overlap
ChIP NPC GSE115407.CTCF.NPC 130 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 128 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 130 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 130 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 130 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 130 bp overlap
ChIP SEM GSE117864.CTCF.SEM 130 bp overlap
ChIP SK-N-SH ENCFF731NJX 130 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 130 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 130 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 96 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 130 bp overlap
ChIP UPCI-SCC-090 GSE143026.CTCF.UPCI-SCC-090 111 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 130 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 130 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 130 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 130 bp overlap
ChIP WTC11 ENCFF658QVH 130 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 113 bp overlap
ChIP brain ENCFF099ASU 130 bp overlap
ChIP brain ENCFF685VRG 130 bp overlap
ChIP brain ENCFF685VRG 130 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 130 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 130 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 130 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 130 bp overlap
ChIP endodermal cell ENCFF471YCZ 130 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 130 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 130 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 130 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 130 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 130 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 130 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 130 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 130 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 130 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 130 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 130 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 113 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 127 bp overlap
ChIP hepatocyte ENCFF263BLJ 130 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 130 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 81 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 130 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 130 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 88 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 130 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 130 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 130 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 100 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 130 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 109 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 112 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 130 bp overlap
ChIP islet ERP004003.CTCF.islet 130 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 130 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 130 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 130 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 107 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 130 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 124 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 130 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 130 bp overlap
ChIP nephron ENCFF411ACD 130 bp overlap
ChIP nephron ENCFF589HXU 130 bp overlap
ChIP nephron ENCFF972IQB 130 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 130 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 130 bp overlap
ChIP neural cell ENCFF335ADI 130 bp overlap
ChIP neural crest cell ENCFF182LWK 119 bp overlap
ChIP neural progenitor cell ENCFF420RBO 130 bp overlap
ChIP neural progenitor cell ENCFF581WPG 130 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 130 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 130 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 130 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 130 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 130 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 130 bp overlap
ChIP prostate ENCSR946MNG.CTCF.prostate 130 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 130 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 130 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 129 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 122 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 102 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 130 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 110 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 130 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 71 bp overlap
NANOG 3 datasets
ChIP GM23338 ENCFF065NZG 56 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 118 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 66 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 130 bp overlap
RAD21 24 datasets
ChIP GM12878 ENCFF046CBW 130 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 102 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 93 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 130 bp overlap
ChIP H1 ENCFF698EWO 130 bp overlap
ChIP H1 ENCFF967OJF 112 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 130 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 130 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 67 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 130 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 112 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 108 bp overlap
ChIP SK-N-SH ENCFF747MAS 130 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 130 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 130 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 130 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 130 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 130 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 130 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 130 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 130 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 130 bp overlap
ChIP neural cell ENCFF564MOT 130 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 78 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 92 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 128 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 123 bp overlap
SMC3 4 datasets
ChIP GP5D GSE51234.SMC3.GP5D 130 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 94 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 130 bp overlap
ChIP neural cell ENCFF795YGY 130 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 130 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 130 bp overlap
STAG2 1 dataset
ChIP HL-60 GSE131577.STAG2.HL-60 99 bp overlap
TFAP2B 1 dataset
Motif DE_24h DE_24h-TFAP2B_MA0813.1 13 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 120 bp overlap
ZNF76 1 dataset
Motif DE_24h DE_24h-ZNF76_MA1716.2 17 bp overlap
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