chr1 : 197,439,755 197,440,029
274 bp 17 TFs 1 linked gene
This 274 bp open chromatin element is linked to CRB1 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CRB1 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:197,434,755 – 197,445,029
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP HeLa GSE151038.BRD4.HeLa 128 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 274 bp overlap
EP300 1 dataset
ChIP HeLa-S3 ENCFF245KNK 117 bp overlap
FOS 1 dataset
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 113 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 237 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 238 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 99 bp overlap
MYCN 1 dataset
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 182 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 260 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 143 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 274 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 264 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 274 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 260 bp overlap
ChIP hESC GSE18292.NANOG.hESC 179 bp overlap
POU5F1 12 datasets
ChIP GM23338 ENCFF333SNB 271 bp overlap
ChIP H1 ENCFF698ZAP 191 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 274 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 241 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 177 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 274 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 266 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 176 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 234 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 274 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 274 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 136 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 274 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 274 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 274 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 274 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 274 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 274 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 274 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 111 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 274 bp overlap
TEAD4 1 dataset
ChIP hESC GSE99202.TEAD4.hESC 246 bp overlap
TWIST1 3 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 233 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 274 bp overlap
ChIP SHEP-21N_DOX_24H GSE80151.TWIST1.SHEP-21N_DOX_24H 205 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 78 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 87 bp overlap