chr10 : 117,198,137 117,198,892
755 bp 20 TFs 2 linked genes
This 755 bp open chromatin element is linked to PDZD8 and SHTN1 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PDZD8 177.1 kb Distal Multiome
SHTN1 192.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:117,193,137 – 117,203,892
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 285 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 109 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 233 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 208 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 330 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 448 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 155 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 207 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 184 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 181 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 173 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 124 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 168 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk GSE83725.PAX3-FOXO1.Hs-352-Sk 56 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 51 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 332 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 408 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 271 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 269 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 187 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 308 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 738 bp overlap
SPI1 5 datasets
ChIP K-562 GSE70482.SPI1.K-562 168 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 149 bp overlap
ChIP K562 ENCFF410ORC 190 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 132 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 111 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 183 bp overlap
ZNF281 1 dataset
ChIP K-562 GSE121133.ZNF281.K-562 198 bp overlap