chr10 : 54,475,907 54,476,596
689 bp 51 TFs 0 linked genes
This 689 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:54,470,907 – 54,481,596
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 1 dataset
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 287 bp overlap
BACH2 1 dataset
Motif DE_60h DE_60h-BACH2_MA1470.2 19 bp overlap
BARX2 1 dataset
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
CEBPA 1 dataset
Motif DE_60h DE_60h-CEBPA_MA0102.5 10 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 315 bp overlap
FOS 1 dataset
Motif DE_60h DE_60h-FOS_MA1951.2 13 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 253 bp overlap
ChIP DE DE-FOXA2-1 553 bp overlap
ChIP DE DE-FOXA2-2 564 bp overlap
FOXH1 1 dataset
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 515 bp overlap
ChIP DE DE-GATA4-2 555 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 464 bp overlap
ChIP DE DE-GATA6-2 601 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 493 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 540 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 408 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 477 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 512 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 506 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 457 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
IRF3 1 dataset
Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap
Isl1 1 dataset
Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PAX3 2 datasets
Motif DE_60h DE_60h-PAX3_MA0780.1 10 bp overlap
Motif DE_60h DE_60h-PAX3_MA1546.2 14 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
PKNOX1 1 dataset
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
Pax7 1 dataset
Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SCRT1 1 dataset
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 549 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 329 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 525 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 344 bp overlap
SMAD3 1 dataset
Motif DE_60h DE_60h-SMAD3_MA0795.1 10 bp overlap
SPIC 1 dataset
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Smad4 1 dataset
Motif DE_60h DE_60h-Smad4_MA1153.2 7 bp overlap
Stat2 1 dataset
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
TEF 1 dataset
Motif DE_60h DE_60h-TEF_MA0843.2 10 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
VENTX 1 dataset
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
ZBTB17 1 dataset
Motif DE_60h DE_60h-ZBTB17_MA2102.1 8 bp overlap
ZBTB18 1 dataset
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 148 bp overlap
ZNF184 1 dataset
Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap
ZNF549 1 dataset
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap