chr10 : 50,629,879 50,630,062
183 bp 31 TFs 2 linked genes
This 183 bp open chromatin element is linked to SGMS1 and SGMS1-AS1 and is bound by 31 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SGMS1 5.9 kb Proximal Proximity
SGMS1-AS1 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:50,624,879 – 50,635,062
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 129 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 72 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 183 bp overlap
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 117 bp overlap
ESR1 4 datasets
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 50 bp overlap
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 69 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 168 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 154 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOSL2 1 dataset
Motif ES_0h ES_0h-FOSL2_MA0478.2 10 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 149 bp overlap
GABPA 1 dataset
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 183 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 183 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 168 bp overlap
NHLH2 1 dataset
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 99 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 71 bp overlap
PGR 12 datasets
ChIP AB32 GSE31129.PGR.AB32 183 bp overlap
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 87 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 105 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 183 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 183 bp overlap
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 150 bp overlap
ChIP T-47D_PG GSE68356.PGR.T-47D_PG 145 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 183 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 183 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 183 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 183 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 183 bp overlap
POLR2A 1 dataset
ChIP erythroblast ENCFF498VMR 183 bp overlap
POU5F1 2 datasets
ChIP H1 ENCFF698ZAP 183 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 183 bp overlap
RFX4 1 dataset
Motif ES_0h ES_0h-RFX4_MA0799.3 13 bp overlap
SNAI1 1 dataset
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 183 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 175 bp overlap
Stat5b 1 dataset
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TCF12 2 datasets
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 96 bp overlap
TCF3 1 dataset
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF175 1 dataset
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF317 1 dataset
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 181 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF582 1 dataset
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF707 1 dataset
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF93 1 dataset
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap