chr1 : 184,661,485 184,662,466
981 bp 25 TFs 2 linked genes
This 981 bp open chromatin element is linked to ENSG00000286378 and ENSG00000285847 and is bound by 25 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000286378 1.8 kb Proximal Proximity
ENSG00000285847 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:184,656,485 – 184,667,466
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
AR 8 datasets
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 202 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 224 bp overlap
ChIP LTAD_EtOH GSE94577.AR.LTAD_EtOH 311 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 370 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 312 bp overlap
ChIP breast_tumor_Male_8 GSE104399.AR.breast_tumor_Male_8 314 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 132 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 207 bp overlap
BRD4 3 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 206 bp overlap
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 191 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 176 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 337 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 91 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 95 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 353 bp overlap
ChIP hESC GSE26097.EOMES.hESC 84 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 374 bp overlap
FOXA1 3 datasets
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 172 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 208 bp overlap
ChIP prostate_P29 GSE130408.FOXA1.prostate_P29 181 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 904 bp overlap
ChIP DE DE-FOXA2-2 903 bp overlap
GATA2 5 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 62 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 59 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 59 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 60 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 53 bp overlap
GATA3 3 datasets
ChIP Kelly GSE65664.GATA3.Kelly 95 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 85 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 128 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 836 bp overlap
ChIP DE DE-GATA4-2 939 bp overlap
ChIP foregut GSE117136.GATA4.foregut 270 bp overlap
ChIP foregut GSE117136.GATA4.foregut 181 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 544 bp overlap
ChIP DE DE-GATA6-1 256 bp overlap
ChIP DE DE-GATA6-2 926 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 592 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 158 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 150 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 459 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 212 bp overlap
HOXB13 31 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 221 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 104 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 384 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 367 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 408 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 92 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 237 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 498 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 199 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 345 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 277 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 483 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 444 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 339 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 440 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 413 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 394 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 663 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 310 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 474 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 178 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 321 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 506 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 525 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 384 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 455 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 240 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 563 bp overlap
ChIP prostate_P5 GSE130408.HOXB13.prostate_P5 202 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 326 bp overlap
ChIP prostate_P7 GSE130408.HOXB13.prostate_P7 188 bp overlap
HSF1 2 datasets
ChIP MO91 GSE45852.HSF1.MO91 225 bp overlap
ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 175 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 64 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 410 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 417 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 819 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 157 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 290 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 224 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 981 bp overlap
TBX21 2 datasets
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 144 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 235 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 52 bp overlap