chr9 : 76,206,889 76,207,304
415 bp 23 TFs 0 linked genes
This 415 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:76,201,889 – 76,212,304
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 297 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 343 bp overlap
CTCF 2 datasets
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 80 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 234 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 316 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 275 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 414 bp overlap
ChIP DE DE-FOXA2-2 342 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 415 bp overlap
ChIP DE DE-GATA4-2 415 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 306 bp overlap
ChIP foregut GSE117136.GATA4.foregut 354 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 392 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 415 bp overlap
ChIP DE DE-GATA6-2 415 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 357 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 415 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 415 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 335 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 415 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 390 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 415 bp overlap
ChIP foregut GSE117136.GATA6.foregut 283 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 386 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 258 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 365 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 407 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 323 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 287 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 278 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 395 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 308 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 192 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 316 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 328 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 292 bp overlap
RUVBL2 1 dataset
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 192 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 399 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 358 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 143 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 280 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 274 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 281 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 101 bp overlap
SS18 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 141 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 168 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 120 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 147 bp overlap
TEAD1 4 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 272 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 193 bp overlap
ChIP WTC11 ENCFF502QUV 291 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 226 bp overlap
TEAD4 5 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 316 bp overlap
ChIP H1 ENCFF778PAX 122 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 187 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 138 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 203 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 276 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 232 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 213 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 76 bp overlap
ZNF266 3 datasets
ChIP HEK293 ENCFF483FIW 267 bp overlap
ChIP HEK293 ENCSR466VYP.ZNF266.HEK293 212 bp overlap
ChIP HEK293T GSE78099.ZNF266.HEK293T 192 bp overlap