chr9 : 1,042,136 1,042,263
127 bp 18 TFs 3 linked genes
This 127 bp open chromatin element is linked to ENSG00000286684, LINC01230, and DMRT2 and is bound by 18 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000286684 344 bp At TSS Proximity
LINC01230 3.4 kb Proximal Proximity
DMRT2 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:1,037,136 – 1,047,263
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 127 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 127 bp overlap
BRD4 1 dataset
ChIP HAP1 GSE108387.BRD4.HAP1 55 bp overlap
CTCF 1 dataset
ChIP keratinocyte GSE154221.CTCF.keratinocyte 127 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 127 bp overlap
EZH2 8 datasets
ChIP GM23338 ENCFF613YON 127 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 127 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 127 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 127 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 116 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 127 bp overlap
ChIP keratinocyte ENCFF070STK 109 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 127 bp overlap
JARID2 1 dataset
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 127 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 127 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 127 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RNF2 1 dataset
ChIP HUES-64 GSE104059.RNF2.HUES-64 60 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 127 bp overlap
SMARCA4 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 127 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 113 bp overlap
ChIP H1 ENCFF881NFR 127 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap