Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

36 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 254 bp overlap

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 65 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 264 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 308 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 490 bp overlap

CTCF 1 dataset

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 257 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 234 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 269 bp overlap

FOXP1 1 dataset

ChIP LNCaP GSE62492.FOXP1.LNCaP 135 bp overlap

GATA1::TAL1 1 dataset

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 396 bp overlap

ChIP DE DE-GATA4-2 689 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 195 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 498 bp overlap

ChIP DE DE-GATA6-2 583 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 367 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

Lef1 1 dataset

Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap

MEF2D 1 dataset

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 241 bp overlap

NEUROD1 7 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 598 bp overlap

ChIP D283-Med GSE92582.NEUROD1.D283-Med 112 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 570 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 59 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 315 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 208 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 398 bp overlap

NEUROG2 1 dataset

Motif DE_60h DE_60h-NEUROG2_MA0669.1 10 bp overlap

NKX2-2 1 dataset

Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 263 bp overlap

PBX3 1 dataset

Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

PKNOX1 1 dataset

ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 192 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 303 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

TP53 1 dataset

ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 128 bp overlap

Tfcp2l1 1 dataset

Motif DE_60h DE_60h-Tfcp2l1_MA0145.2 14 bp overlap

ZFP14 1 dataset

Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap

ZNF214 1 dataset

Motif DE_60h DE_60h-ZNF214_MA1975.2 13 bp overlap

ZNF24 1 dataset

Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap

ZNF707 1 dataset

Motif DE_60h DE_60h-ZNF707_MA1715.1 15 bp overlap

Genome Browser