chr1 : 165,439,258 165,439,657
399 bp 21 TFs 1 linked gene
This 399 bp open chromatin element is linked to RXRG and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RXRG 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:165,434,258 – 165,444,657
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 188 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 122 bp overlap
CTCF 2 datasets
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 94 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 153 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 175 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 251 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 360 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 216 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 215 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 119 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 284 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 197 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 158 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 282 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 189 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 145 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 186 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 270 bp overlap
ChIP neural cell ENCFF882LXX 336 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 206 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 195 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 201 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 195 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 314 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 184 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 171 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 146 bp overlap