chr1 : 163,203,664 163,203,966
302 bp 20 TFs 1 linked gene
This 302 bp open chromatin element is linked to RGS5 and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RGS5 748 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:163,198,664 – 163,208,966
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 301 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 148 bp overlap
FOS 2 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 262 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 209 bp overlap
FOSL2 3 datasets
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 185 bp overlap
ChIP SK-N-SH ENCFF127ZDW 224 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 148 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 100 bp overlap
ChIP DE DE-FOXA2-1 302 bp overlap
ChIP DE DE-FOXA2-2 302 bp overlap
GATA3 1 dataset
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 209 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 302 bp overlap
ChIP DE DE-GATA4-2 302 bp overlap
ChIP G296S GSE85628.GATA4.G296S 237 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 237 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 261 bp overlap
ChIP foregut GSE117136.GATA4.foregut 302 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 302 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 302 bp overlap
GATA6 19 datasets
ChIP AGS GSE51705.GATA6.AGS 279 bp overlap
ChIP AGS GSE51936.GATA6.AGS 138 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 209 bp overlap
ChIP DE DE-GATA6-1 302 bp overlap
ChIP DE DE-GATA6-2 302 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 302 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 302 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 302 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 302 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 178 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 240 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 302 bp overlap
ChIP foregut GSE117136.GATA6.foregut 302 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 214 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 302 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 292 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 275 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 210 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 114 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 282 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 176 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 240 bp overlap
NR3C1 1 dataset
ChIP THP-1 GSE99887.NR3C1.THP-1 73 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 215 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 302 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 86 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 155 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 271 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 248 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 217 bp overlap
TP53 3 datasets
ChIP GM00011 GSE55727.TP53.GM00011 263 bp overlap
ChIP GM06170 GSE55727.TP53.GM06170 164 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 181 bp overlap
TP63 10 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 302 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 177 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 302 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 289 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 220 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 215 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 294 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 251 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 246 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 231 bp overlap