chr7 : 24,569,736 24,570,144
408 bp 22 TFs 1 linked gene
This 408 bp open chromatin element is linked to PALS2 and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PALS2 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:24,564,736 – 24,575,144
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 316 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 297 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 282 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 253 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 248 bp overlap
EZH2 2 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 408 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 137 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 408 bp overlap
ChIP DE DE-FOXA2-2 408 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 408 bp overlap
ChIP DE DE-GATA4-2 408 bp overlap
ChIP foregut GSE117136.GATA4.foregut 354 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 408 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 408 bp overlap
ChIP DE DE-GATA6-2 408 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 371 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 408 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 408 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 408 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 371 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 408 bp overlap
ChIP foregut GSE117136.GATA6.foregut 408 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 389 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 395 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 225 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 305 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 160 bp overlap
RNF2 4 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 275 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 327 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 272 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 408 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 134 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 408 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 408 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 276 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 267 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 408 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 408 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 113 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 274 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 314 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 120 bp overlap