chr7 : 13,321,927 13,322,559
632 bp 36 TFs 0 linked genes
This 632 bp open chromatin element has no linked target genes and is bound by 36 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:13,316,927 – 13,327,559
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
Arid3b 1 dataset
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 213 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
GATA6 3 datasets
ChIP AGS GSE51936.GATA6.AGS 79 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 318 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 397 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 143 bp overlap
HNF1B 1 dataset
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 74 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 141 bp overlap
HOXB4 2 datasets
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 162 bp overlap
ChIP HCC2157 GSE46055.KDM5B.HCC2157 117 bp overlap
MEF2B 1 dataset
Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 237 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 110 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 540 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 240 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 522 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 583 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 2 datasets
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 200 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 159 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 450 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 210 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 336 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 272 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 387 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 332 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap