chr6 : 131,957,902 131,958,071
169 bp 26 TFs 1 linked gene
This 169 bp open chromatin element is linked to CCN2 and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CCN2 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:131,952,902 – 131,963,071
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP L826 GSE83671.AFF1.L826 169 bp overlap
AR 5 datasets
ChIP 22Rv1 GSE96652.AR.22Rv1 169 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 116 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 131 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 119 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 169 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 169 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 159 bp overlap
ESR1 8 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 169 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 169 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 163 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 169 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 145 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 105 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 159 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 133 bp overlap
FOXA1 37 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 169 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 169 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 169 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 127 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 169 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 169 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 168 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 169 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 169 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 169 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 152 bp overlap
ChIP MCF-7 ENCFF465LTH 169 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 169 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 169 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 169 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 163 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 151 bp overlap
ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 157 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 154 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 162 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 169 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 103 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 162 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 113 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 114 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 169 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 163 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 169 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 169 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 169 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 169 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 161 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 169 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 169 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 169 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 169 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 169 bp overlap
ChIP DE DE-FOXA2-2 169 bp overlap
GATA2 4 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 169 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 169 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 169 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 169 bp overlap
GATA3 13 datasets
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 108 bp overlap
ChIP MCF-7 ENCFF352QVM 169 bp overlap
ChIP MCF-7 ENCFF437NQS 159 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 169 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 169 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 169 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 141 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 169 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 159 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 159 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 169 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 155 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 169 bp overlap
ChIP DE DE-GATA4-2 169 bp overlap
ChIP foregut GSE117136.GATA4.foregut 169 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 169 bp overlap
ChIP DE DE-GATA6-2 169 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 142 bp overlap
ChIP foregut GSE117136.GATA6.foregut 169 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 110 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 56 bp overlap
KLF4 1 dataset
ChIP MCF-7 ENCFF948KTQ 169 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 169 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 132 bp overlap
NR3C1 4 datasets
ChIP MCF-7 GSE152203.NR3C1.MCF-7 169 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 169 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 169 bp overlap
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 159 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 169 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 169 bp overlap
POLR2A 1 dataset
ChIP transverse colon ENCFF607LKE 169 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 169 bp overlap
SPDEF 2 datasets
ChIP MCF-7 ENCFF827PZY 169 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 169 bp overlap
SRF 2 datasets
ChIP MCF-7 ENCFF508RYE 169 bp overlap
ChIP MCF-7 ENCSR000BVA.SRF.MCF-7 169 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 122 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 117 bp overlap
ZNF24 1 dataset
ChIP MCF-7 ENCSR503VTG.ZNF24.MCF-7 108 bp overlap
ZNF629 1 dataset
ChIP HepG2 ENCFF490FFQ 69 bp overlap