chr6 : 70,128,399 – 70,129,176
777 bp 35 TFs 0 linked genes
This 777 bp open chromatin element has no linked target genes and is bound by 35 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:70,123,399 – 70,134,176
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
AR 12 datasets
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 233 bp overlap
ChIP VCaP GSE148358.AR.VCaP 138 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 495 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 453 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 358 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 204 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 116 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 193 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 312 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 258 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 457 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 267 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 404 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 167 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 251 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
ERG 7 datasets
ChIP VCaP GSE28950.ERG.VCaP 167 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 172 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 172 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 249 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 190 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 432 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 277 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 73 bp overlap
ETV1 1 dataset
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 72 bp overlap
FLI1 1 dataset
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 310 bp overlap
FOXA1 41 datasets
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 71 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 106 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 290 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 382 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 101 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 68 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 176 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 64 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 66 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 88 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 547 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 113 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 65 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 98 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 67 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 179 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 51 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 139 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 110 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 146 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 119 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 213 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 99 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 75 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 53 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 240 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 139 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 174 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 56 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 118 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 60 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 69 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 76 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 218 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 621 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 248 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 186 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 249 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 500 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 193 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 576 bp overlap
FOXA2 6 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 172 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 206 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 96 bp overlap
ChIP DE DE-FOXA2-1 752 bp overlap
ChIP DE DE-FOXA2-2 777 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 134 bp overlap
FOXB1 1 dataset
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
GABPA 2 datasets
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 155 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 226 bp overlap
GATA2 1 dataset
ChIP VCaP GSE125236.GATA2.VCaP 162 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 50 bp overlap
ChIP DE DE-GATA4-1 523 bp overlap
ChIP DE DE-GATA4-2 777 bp overlap
ChIP foregut GSE117136.GATA4.foregut 777 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 745 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 421 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 754 bp overlap
ChIP DE DE-GATA6-2 777 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 506 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 607 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 493 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 777 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 627 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 583 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 316 bp overlap
ChIP foregut GSE117136.GATA6.foregut 533 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 139 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 406 bp overlap
HOXB13 7 datasets
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 253 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 251 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 186 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 331 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 184 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 385 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 447 bp overlap
HOXC12 1 dataset
Motif DE_60h DE_60h-HOXC12_MA0906.2 10 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 253 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 325 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 323 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 321 bp overlap
NFIA 1 dataset
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
NFIC 1 dataset
Motif DE_60h DE_60h-NFIC_MA0161.3 7 bp overlap
NFIX 1 dataset
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
PHOX2A 1 dataset
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 285 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 417 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 304 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 257 bp overlap
RFX3 1 dataset
Motif DE_60h DE_60h-RFX3_MA0798.3 16 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 324 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 508 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 553 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 459 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 518 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 327 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 387 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 473 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 551 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Wt1 1 dataset
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
ZNF324 1 dataset
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
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