chr6 : 49,911,296 49,911,632
336 bp 33 TFs 0 linked genes
This 336 bp open chromatin element has no linked target genes and is bound by 33 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:49,906,296 – 49,916,632
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 208 bp overlap
BRD4 2 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 268 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 229 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 336 bp overlap
CTCF 1 dataset
ChIP GM13977 ENCFF528ESQ 103 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOXA1 2 datasets
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 75 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 129 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 204 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 267 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 226 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 303 bp overlap
RNF2 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 181 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 116 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 110 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SS18 3 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 233 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 336 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 336 bp overlap
TFEB 1 dataset
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
TFEC 1 dataset
Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
USF1 4 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 233 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 209 bp overlap
ChIP WTC11 ENCFF699QGS 318 bp overlap
USF2 2 datasets
ChIP H1 ENCFF434EDF 213 bp overlap
ChIP WTC11 ENCFF139JAW 330 bp overlap
YY1 2 datasets
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 278 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 154 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 333 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 76 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 286 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap