Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

CEBPD 1 dataset

Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap

CHD4 1 dataset

ChIP 501-mel GSE134848.CHD4.501-mel 122 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 227 bp overlap

CTCF 2 datasets

Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap

Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap

E2F6 1 dataset

Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 227 bp overlap

FOS 1 dataset

ChIP THP-1_eGFP-Pam3csk-4h GSE103477.FOS.THP-1_eGFP-Pam3csk-4h 144 bp overlap

FOXA1 2 datasets

ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 182 bp overlap

ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 181 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 227 bp overlap

ChIP DE DE-FOXA2-2 227 bp overlap

GATA1 3 datasets

Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 222 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 226 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 212 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 227 bp overlap

ChIP DE DE-GATA4-2 227 bp overlap

ChIP foregut GSE117136.GATA4.foregut 227 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 227 bp overlap

ChIP DE DE-GATA6-2 227 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 227 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 227 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 227 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 227 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 227 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 227 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 227 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 227 bp overlap

GLI3 1 dataset

Motif DE_36h DE_36h-GLI3_MA1491.3 15 bp overlap

Gli1 1 dataset

Motif DE_36h DE_36h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif DE_36h DE_36h-Gli2_MA0734.4 9 bp overlap

HOXD12::ELK1 1 dataset

Motif DE_36h DE_36h-HOXD12ELK1_MA1958.2 13 bp overlap

HSF1 1 dataset

ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 175 bp overlap

Hand1 1 dataset

Motif DE_36h DE_36h-Hand1_MA2123.1 9 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 227 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 227 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 227 bp overlap

KLF17 1 dataset

Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap

Nr2F6 1 dataset

Motif DE_36h DE_36h-Nr2F6_MA0728.1 15 bp overlap

OSR1 1 dataset

Motif DE_36h DE_36h-OSR1_MA1542.2 8 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 175 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap

Rarb 1 dataset

Motif DE_36h DE_36h-Rarb_MA0857.1 16 bp overlap

Rarg 2 datasets

Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap

Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap

Runx1 1 dataset

Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap

SMAD2 2 datasets

Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap

ChIP endoderm GSE29422.SMAD2.endoderm 163 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 227 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 227 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 227 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 178 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 227 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 178 bp overlap

SMARCA4 2 datasets

ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 227 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 227 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 227 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 227 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 183 bp overlap

Stat6 1 dataset

Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 170 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 227 bp overlap

TAL1 4 datasets

ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 185 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 199 bp overlap

ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 155 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 210 bp overlap

THRA 1 dataset

Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 153 bp overlap

ZNF257 2 datasets

Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap

ChIP HEK293T GSE78099.ZNF257.HEK293T 113 bp overlap

ZNF341 1 dataset

ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 97 bp overlap

ZNF652 1 dataset

Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap

ZNF75A 1 dataset

Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap

ZSCAN16 1 dataset

Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap

Zic1::Zic2 1 dataset

Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap

Genome Browser