Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

18 transcription factors

ARNTL 1 dataset

ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 229 bp overlap

CDK6 1 dataset

ChIP KB GSE52469.CDK6.KB 110 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 495 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 539 bp overlap

ChIP DE DE-FOXA2-2 464 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 538 bp overlap

ChIP DE DE-GATA4-2 539 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 527 bp overlap

ChIP DE DE-GATA6-2 539 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 126 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 248 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 459 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 178 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 227 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 508 bp overlap

NEUROD1 2 datasets

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 188 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 219 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 201 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 539 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 535 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 114 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 294 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 124 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 539 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 539 bp overlap

SMAD4 2 datasets

ChIP endoderm GSE29422.SMAD4.endoderm 215 bp overlap

ChIP endoderm GSE29422.SMAD4.endoderm 193 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 221 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 512 bp overlap

STAT5A 1 dataset

ChIP MV4-11 GSE64862.STAT5A.MV4-11 127 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 196 bp overlap

TRIM28 1 dataset

ChIP AF22 GSE84259.TRIM28.AF22 273 bp overlap

ZFP57 1 dataset

ChIP hESC GSE115387.ZFP57.hESC 136 bp overlap

ZNF440 1 dataset

ChIP HEK293T GSE78099.ZNF440.HEK293T 245 bp overlap

Gene	Dist. to TSS	Distance	Link type
RNF130	12.3 kb	Distal	Multiome
TBC1D9B	151.9 kb	Distal	Multiome
MRNIP	200.9 kb	Distal	Multiome
MAPK9	232.3 kb	Distal	Multiome
ENSG00000248367	232.4 kb	Distal	Multiome
SQSTM1	238.9 kb	Distal	Multiome
MGAT4B	252.9 kb	Distal	Multiome
LTC4S	264.2 kb	Distal	Multiome
GFPT2	293.6 kb	Distal	Multiome

Genome Browser