chr5 : 120,576,500 120,576,895
395 bp 21 TFs 0 linked genes
This 395 bp open chromatin element has no linked target genes and is bound by 21 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:120,571,500 – 120,581,895
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
BRD9 1 dataset
ChIP Mel270 GSE124720.BRD9.Mel270 164 bp overlap
CTCF 21 datasets
ChIP GM23338 ENCFF531QOI 294 bp overlap
ChIP GM23338 ENCFF531QOI 95 bp overlap
ChIP GM23338 ENCFF772DML 170 bp overlap
ChIP H1 ENCFF414GZI 194 bp overlap
ChIP H1 ENCFF764RHO 232 bp overlap
ChIP H9 ENCFF152GTF 202 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 192 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 127 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 162 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 171 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 189 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 234 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 204 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 58 bp overlap
ChIP MCF-7 ENCFF139NQI 206 bp overlap
ChIP MCF-7 ENCFF162GNE 200 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 127 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 116 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 203 bp overlap
ChIP endodermal cell ENCFF471YCZ 260 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 158 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 225 bp overlap
ChIP H1 ENCFF967OJF 242 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 75 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 158 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 265 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 185 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 152 bp overlap
SOX21 1 dataset
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF410 1 dataset
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap