chr5 : 117,039,619 117,040,030
411 bp 30 TFs 0 linked genes
This 411 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:117,034,619 – 117,045,030
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 231 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 274 bp overlap
ChIP DE DE-FOXA2-2 245 bp overlap
FOXN3 1 dataset
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
FOXP2 1 dataset
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
GATA1 1 dataset
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 335 bp overlap
ChIP DE DE-GATA4-2 387 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 318 bp overlap
ChIP foregut GSE117136.GATA4.foregut 274 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 309 bp overlap
ChIP DE DE-GATA6-2 387 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 352 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 272 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 295 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 327 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 356 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 277 bp overlap
ChIP foregut GSE117136.GATA6.foregut 350 bp overlap
MGA 1 dataset
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
NKX2-4 1 dataset
Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.NR3C1.HeLa-B2_P65KD_TA_TNFA 94 bp overlap
Nr2e3 1 dataset
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
OLIG2 1 dataset
Motif DE_60h DE_60h-OLIG2_MA0678.1 10 bp overlap
OLIG3 1 dataset
Motif DE_60h DE_60h-OLIG3_MA0827.1 10 bp overlap
OSR2 1 dataset
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PAX6 1 dataset
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
Prdm15 1 dataset
Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap
Rhox11 1 dataset
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 292 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 156 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 239 bp overlap
STAT3 1 dataset
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 208 bp overlap
TBX1 1 dataset
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX4 1 dataset
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
ZBTB24 1 dataset
Motif DE_60h DE_60h-ZBTB24_MA2330.1 10 bp overlap
ZBTB26 1 dataset
Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap
ZNF416 1 dataset
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap