Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

25 transcription factors

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 439 bp overlap

FOXA1 4 datasets

ChIP 22Rv1 GSE96652.FOXA1.22Rv1 206 bp overlap

ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 422 bp overlap

ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 206 bp overlap

ChIP PDAC GSE64557.FOXA1.PDAC 457 bp overlap

FOXA2 3 datasets

ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 261 bp overlap

ChIP DE DE-FOXA2-1 806 bp overlap

ChIP DE DE-FOXA2-2 840 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 782 bp overlap

ChIP DE DE-GATA4-2 865 bp overlap

ChIP YCC-3 GSE51705.GATA4.YCC-3 242 bp overlap

ChIP foregut GSE117136.GATA4.foregut 436 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 735 bp overlap

ChIP DE DE-GATA6-2 948 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 535 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 761 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 723 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 796 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 793 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 656 bp overlap

ChIP YCC-3 GSE51705.GATA6.YCC-3 243 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 500 bp overlap

HNF4A 1 dataset

ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 179 bp overlap

HOXC6 1 dataset

ChIP 22Rv1 GSE129951.HOXC6.22Rv1 498 bp overlap

HSF1 1 dataset

ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 266 bp overlap

NANOG 6 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 153 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 379 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 562 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 511 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NR1H4::RXRA 1 dataset

Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap

NR1I3 1 dataset

Motif DE_60h DE_60h-NR1I3_MA1534.2 8 bp overlap

OLIG2 1 dataset

Motif DE_60h DE_60h-OLIG2_MA0678.1 10 bp overlap

OLIG3 1 dataset

Motif DE_60h DE_60h-OLIG3_MA0827.1 10 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 301 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 341 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 213 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 281 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 304 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 455 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 410 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 487 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 624 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 239 bp overlap

TEAD4 3 datasets

ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 69 bp overlap

ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 156 bp overlap

ChIP MCF-7_Veh GSE125594.TEAD4.MCF-7_Veh 240 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 186 bp overlap

ZFP42 1 dataset

ChIP HEK293 GSE76494.ZFP42.HEK293 140 bp overlap

ZSCAN5C 2 datasets

ChIP HEK293 ENCFF343DTU 357 bp overlap

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 181 bp overlap

Genome Browser