Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

DUX4 3 datasets

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap

Dux 3 datasets

Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 210 bp overlap

FEZF2 3 datasets

Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap

Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap

Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 360 bp overlap

ChIP DE DE-FOXA2-2 362 bp overlap

GATA2 1 dataset

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 246 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 329 bp overlap

ChIP DE DE-GATA4-2 370 bp overlap

ChIP foregut GSE117136.GATA4.foregut 325 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 320 bp overlap

ChIP DE DE-GATA6-2 358 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 354 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 396 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 303 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 392 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 410 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 354 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 343 bp overlap

ChIP foregut GSE117136.GATA6.foregut 340 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 294 bp overlap

GCM1 1 dataset

Motif DE_60h DE_60h-GCM1_MA0646.2 10 bp overlap

Hnf1A 1 dataset

Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 152 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 178 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 155 bp overlap

LHX6 3 datasets

Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap

Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap

Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NANOG 3 datasets

ChIP WA01 ERP004238.NANOG.WA01 248 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 155 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 347 bp overlap

NR4A1 1 dataset

Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_60h DE_60h-NR4A2_MA0160.3 8 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_60h DE_60h-Nr1h3Rxra_MA0494.2 16 bp overlap

PLAG1 2 datasets

Motif DE_48h DE_48h-PLAG1_MA0163.1 14 bp overlap

Motif DE_60h DE_60h-PLAG1_MA0163.1 14 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 199 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 268 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 329 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 357 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 324 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 271 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 351 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 301 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 311 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 350 bp overlap

SMAD3 3 datasets

Motif DE_60h DE_60h-SMAD3_MA0795.1 10 bp overlap

Motif DE_72h DE_72h-SMAD3_MA0795.1 10 bp overlap

ChIP endoderm GSE29422.SMAD3.endoderm 244 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 212 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S10-DE-d1-BAF155-exp1 154 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 215 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 190 bp overlap

STAT1::STAT2 1 dataset

Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap

Sox6 1 dataset

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 218 bp overlap

TCF7L2 1 dataset

Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap

TP53 2 datasets

Motif DE_60h DE_60h-TP53_MA0106.3 18 bp overlap

Motif DE_72h DE_72h-TP53_MA0106.3 18 bp overlap

ZNF143 1 dataset

Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap

ZNF549 1 dataset

Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap

ZNF768 2 datasets

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Genome Browser