chr5 : 87,266,481 87,266,727
246 bp 21 TFs 1 linked gene
This 246 bp open chromatin element is linked to RASA1 and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RASA1 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:87,261,481 – 87,271,727
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 246 bp overlap
CUX1 2 datasets
ChIP MCF-7 ENCFF779ATB 140 bp overlap
ChIP MCF-7 ENCSR017CEO.CUX1.MCF-7 77 bp overlap
EZH2 1 dataset
ChIP H1 ENCFF232NZA 128 bp overlap
FOXA1 9 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 211 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 150 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 103 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 190 bp overlap
ChIP HepG2 ENCFF207NVJ 176 bp overlap
ChIP HepG2 ENCFF740VZW 125 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 210 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 201 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 246 bp overlap
FOXA2 7 datasets
ChIP DE DE-FOXA2-1 246 bp overlap
ChIP DE DE-FOXA2-2 246 bp overlap
ChIP HepG2 ENCFF533COJ 106 bp overlap
ChIP HepG2 ENCFF570ABM 204 bp overlap
ChIP HepG2 ENCFF894AYY 246 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 246 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 246 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 246 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 155 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 158 bp overlap
GATA4 3 datasets
ChIP foregut GSE117136.GATA4.foregut 237 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 246 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 246 bp overlap
GATA6 5 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 241 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 240 bp overlap
ChIP foregut GSE117136.GATA6.foregut 246 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 246 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 246 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 213 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 216 bp overlap
ONECUT1 3 datasets
ChIP H9 ERP004206.ONECUT1.H9 105 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 185 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 216 bp overlap
ONECUT2 2 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 64 bp overlap
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 58 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 137 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 55 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 246 bp overlap
ZNF816 2 datasets
ChIP HepG2 ENCFF294VPD 246 bp overlap
ChIP HepG2 ENCFF294VPD 246 bp overlap