chr5 : 86,565,907 – 86,566,329
422 bp 32 TFs 0 linked genes
This 422 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:86,560,907 – 86,571,329
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
BARX2 1 dataset
Motif ES_0h ES_0h-BARX2_MA1471.2 9 bp overlap
BCL6 2 datasets
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
Motif ES_0h ES_0h-BCL6_MA0463.3 13 bp overlap
CEBPA 1 dataset
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CTCF 86 datasets
ChIP 22Rv1 ENCFF466OXN 403 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 412 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 138 bp overlap
ChIP A549 ENCFF034FVO 277 bp overlap
ChIP A549 ENCFF434LUY 217 bp overlap
ChIP A549 ENCFF669BWC 367 bp overlap
ChIP A673 ENCFF123WOM 350 bp overlap
ChIP C4-2B ENCFF821XVN 240 bp overlap
ChIP Calu3 ENCFF526MDS 348 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 119 bp overlap
ChIP D721Med ENCFF513FYD 197 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM12864 ENCFF357DQE 274 bp overlap
ChIP GM12872 ENCFF697BYI 266 bp overlap
ChIP GM12873 ENCFF711LOS 248 bp overlap
ChIP GM12874 ENCFF942MTD 215 bp overlap
ChIP GM12878 ENCFF217EAX 340 bp overlap
ChIP GM12878 ENCFF485TGR 251 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM12878 ENCFF635MMB 204 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM23338 ENCFF531QOI 195 bp overlap
ChIP GM23338 ENCFF772DML 151 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 256 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 80 bp overlap
ChIP H54 ENCFF255TVO 84 bp overlap
ChIP H9 ENCFF152GTF 266 bp overlap
ChIP HCT116 ENCFF003KHP 307 bp overlap
ChIP HCT116 ENCFF209YMI 252 bp overlap
ChIP HCT116 ENCFF373YMA 271 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 102 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HepG2 ENCFF127KUP 213 bp overlap
ChIP HepG2 ENCFF194VBQ 298 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 89 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 146 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 244 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP KMS-11 ENCFF853JKX 422 bp overlap
ChIP LNCAP ENCFF223HIG 415 bp overlap
ChIP LNCAP ENCFF700QXT 370 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP Loucy ENCFF359TVQ 218 bp overlap
ChIP Loucy ENCFF359TVQ 123 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 212 bp overlap
ChIP MCF-7 ENCFF139NQI 234 bp overlap
ChIP MCF-7 ENCFF162GNE 206 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF210JUZ 292 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF494VXA 98 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 137 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 114 bp overlap
ChIP NCI-H929 ENCFF305JAB 384 bp overlap
ChIP OCI-LY1 ENCFF455ESK 287 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 133 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 356 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 202 bp overlap
ChIP PC-3 ENCFF487TUI 230 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 356 bp overlap
ChIP Panc1 ENCFF056JQX 422 bp overlap
ChIP Panc1 ENCFF056JQX 238 bp overlap
ChIP Peyer's patch ENCFF828IDE 272 bp overlap
ChIP RWPE2 ENCFF911IEE 247 bp overlap
ChIP RWPE2 ENCFF911IEE 246 bp overlap
ChIP SK-N-SH ENCFF575DMG 222 bp overlap
ChIP SK-N-SH ENCFF731NJX 215 bp overlap
ChIP VCaP ENCFF858YQT 421 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP body of pancreas ENCFF798MEO 276 bp overlap
ChIP brain ENCFF099ASU 372 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 220 bp overlap
ChIP chondrocyte ENCFF134ORZ 382 bp overlap
ChIP endodermal cell ENCFF471YCZ 206 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 175 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 314 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 151 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 215 bp overlap
ChIP neural progenitor cell ENCFF420RBO 134 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 221 bp overlap
ChIP right lobe of liver ENCFF250KSY 317 bp overlap
DMRTA2 1 dataset
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXC2 1 dataset
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap
Foxq1 1 dataset
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
HLF 2 datasets
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
ChIP HepG2 ENCFF854JLR 239 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 356 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif ES_0h ES_0h-MEIS2_MA0774.1 8 bp overlap
NFIL3 1 dataset
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
PBX3 1 dataset
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PKNOX1 1 dataset
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
PPARG 2 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
PROP1 2 datasets
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
RAD21 13 datasets
ChIP A549 ENCFF047SFC 239 bp overlap
ChIP A549 ENCFF264AHX 300 bp overlap
ChIP GM12878 ENCFF046CBW 250 bp overlap
ChIP H1 ENCFF698EWO 130 bp overlap
ChIP H1 ENCFF967OJF 87 bp overlap
ChIP HCT116 ENCFF568PEO 221 bp overlap
ChIP HepG2 ENCFF360ZSW 197 bp overlap
ChIP HepG2 ENCFF906QIS 205 bp overlap
ChIP Ishikawa ENCFF570JVV 192 bp overlap
ChIP K562 ENCFF634XYR 292 bp overlap
ChIP MCF-7 ENCFF694KOM 256 bp overlap
ChIP MCF-7 ENCFF724VCQ 216 bp overlap
ChIP liver ENCFF522JHE 277 bp overlap
RNF2 1 dataset
ChIP HepG2 ENCFF737WCD 276 bp overlap
SOX14 1 dataset
Motif ES_0h ES_0h-SOX14_MA1562.2 9 bp overlap
SOX21 1 dataset
Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap
SRY 1 dataset
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
TSC22D2 1 dataset
ChIP HepG2 ENCFF869LPB 415 bp overlap
ZNF213 1 dataset
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF282 1 dataset
Motif ES_0h ES_0h-ZNF282_MA1154.2 15 bp overlap
ZNF707 1 dataset
ChIP HepG2 ENCFF084AUR 333 bp overlap
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