Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

27 transcription factors

BHLHE22 2 datasets

Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF031ISE 251 bp overlap

ChIP BLaER1 ENCFF262VBH 320 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 143 bp overlap

ChIP DE DE-FOXA2-2 196 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 407 bp overlap

ChIP DE DE-GATA4-2 480 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 457 bp overlap

ChIP DE DE-GATA6-2 480 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 322 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 454 bp overlap

HAND2 3 datasets

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

IRF2 2 datasets

Motif DE_48h DE_48h-IRF2_MA0051.2 16 bp overlap

Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap

KLF4 3 datasets

Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap

Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap

Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap

MZF1 1 dataset

Motif DE_48h DE_48h-MZF1_MA0056.3 8 bp overlap

NKX2-4 3 datasets

Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap

Motif DE_48h DE_48h-NKX2-4_MA2003.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap

NKX2-8 3 datasets

Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap

Motif DE_48h DE_48h-NKX2-8_MA0673.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-8_MA0673.2 8 bp overlap

Neurod2 2 datasets

Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

Nr1h3::Rxra 3 datasets

Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap

Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap

Motif DE_60h DE_60h-Nr1h3Rxra_MA0494.2 16 bp overlap

Olig2 2 datasets

Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

PBX1 2 datasets

Motif DE_48h DE_48h-PBX1_MA0070.2 9 bp overlap

Motif DE_60h DE_60h-PBX1_MA0070.2 9 bp overlap

PRDM9 3 datasets

Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap

Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap

Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 311 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 335 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 274 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 320 bp overlap

STAT3 3 datasets

Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap

Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap

Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap

Spz1 3 datasets

Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap

Motif DE_48h DE_48h-Spz1_MA0111.1 11 bp overlap

Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap

TAL1::TCF3 2 datasets

Motif DE_48h DE_48h-TAL1TCF3_MA0091.2 10 bp overlap

Motif DE_60h DE_60h-TAL1TCF3_MA0091.2 10 bp overlap

Tcf12 2 datasets

Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Twist2 2 datasets

Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

ZNF331 3 datasets

Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap

Motif DE_48h DE_48h-ZNF331_MA1726.2 10 bp overlap

Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap

ZNF449 2 datasets

Motif DE_48h DE_48h-ZNF449_MA1656.2 10 bp overlap

Motif DE_60h DE_60h-ZNF449_MA1656.2 10 bp overlap

ZNF667 1 dataset

Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap

Gene	Dist. to TSS	Distance	Link type
KIF2A	87.2 kb	Distal	Multiome
DIMT1	184.9 kb	Distal	Multiome
IPO11	193.7 kb	Distal	Multiome
DEPDC1B	1518.9 kb	Distal	Multiome+HiCAR

Genome Browser