chr5 : 35,717,654 35,717,994
340 bp 39 TFs 0 linked genes
This 340 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:35,712,654 – 35,722,994
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
CTCF 56 datasets
ChIP 22Rv1 ENCFF466OXN 340 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 186 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 97 bp overlap
ChIP GM06990 ENCFF471OQT 246 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 166 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 117 bp overlap
ChIP GM12873 ENCFF711LOS 213 bp overlap
ChIP GM12878 ENCFF511URZ 184 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 164 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 307 bp overlap
ChIP GM23338 ENCFF531QOI 225 bp overlap
ChIP GM23338 ENCFF772DML 154 bp overlap
ChIP H1 ENCFF230QSV 150 bp overlap
ChIP H1 ENCFF414GZI 141 bp overlap
ChIP H1 ENCFF764RHO 205 bp overlap
ChIP H9 ENCFF152GTF 181 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 327 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 310 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 109 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 120 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 147 bp overlap
ChIP HCT116 ENCFF003KHP 196 bp overlap
ChIP HCT116 ENCFF209YMI 226 bp overlap
ChIP HEK293 ENCFF498RMM 220 bp overlap
ChIP HFFc6 ENCFF005CJI 240 bp overlap
ChIP HFFc6 ENCFF005CJI 179 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 193 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 220 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 274 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 170 bp overlap
ChIP Loucy ENCFF359TVQ 340 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 180 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 262 bp overlap
ChIP MM.1S ENCFF869JMQ 315 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 194 bp overlap
ChIP OCI-LY1 ENCFF455ESK 297 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 310 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 167 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 271 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 143 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 235 bp overlap
ChIP RWPE2 ENCFF911IEE 340 bp overlap
ChIP RWPE2 ENCFF911IEE 261 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 93 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 340 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 204 bp overlap
ChIP endodermal cell ENCFF471YCZ 254 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 268 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 145 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 212 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 159 bp overlap
ChIP keratinocyte ENCFF046PBT 181 bp overlap
ChIP keratinocyte ENCFF291YDC 150 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 111 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 207 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZBTB7A 1 dataset
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF669 1 dataset
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap