chr5 : 31,815,109 31,815,703
594 bp 23 TFs 3 linked genes
This 594 bp open chromatin element is linked to PDZD2, C5orf22, and DROSHA and is bound by 23 transcription factors.
Linked Genes
3 genes
Link type
Gene Expression Dist. to TSS Distance Link type
PDZD2 176.2 kb Distal Multiome+HiCAR
C5orf22 283.0 kb Distal Multiome
DROSHA 283.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:31,810,109 – 31,820,703
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 219 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 126 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 231 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 233 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 334 bp overlap
ChIP DE DE-GATA4-2 413 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 443 bp overlap
ChIP DE DE-GATA6-2 357 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 369 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 343 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 276 bp overlap
GRHL2 2 datasets
ChIP HBE GSE46194.GRHL2.HBE 146 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 77 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 179 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 172 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 412 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 261 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 347 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 269 bp overlap
NANOG 2 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 134 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 245 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 262 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 448 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 71 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 594 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 594 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 523 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 524 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 547 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 400 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 441 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 556 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 68 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 227 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 111 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 228 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 158 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 167 bp overlap
TP63 2 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 95 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 138 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 261 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 132 bp overlap