chr1 : 86,472,267 86,472,597
330 bp 27 TFs 0 linked genes
This 330 bp open chromatin element has no linked target genes and is bound by 27 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:86,467,267 – 86,477,597
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
ARRB1 1 dataset
ChIP LNCaP-C4-2 GSE55615.ARRB1.LNCaP-C4-2 102 bp overlap
BRD4 1 dataset
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 330 bp overlap
CTCF 4 datasets
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 173 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 280 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 214 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 256 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 106 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 185 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 184 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 211 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 258 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 214 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 163 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
STAT3 1 dataset
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 96 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 142 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 235 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 205 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 53 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF263 5 datasets
ChIP HEK293 ENCFF336CWQ 330 bp overlap
ChIP HEK293T GSE78099.ZNF263.HEK293T 125 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 206 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 249 bp overlap
ChIP K562 ENCFF640RNA 330 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 257 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap