Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

33 transcription factors

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BRD4 3 datasets

ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 313 bp overlap

ChIP COLO-205 GSE73319.BRD4.COLO-205 249 bp overlap

ChIP HCT-15 GSE73319.BRD4.HCT-15 313 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap

CDX2 1 dataset

ChIP LS180_125 GSE31939.CDX2.LS180_125 117 bp overlap

CEBPD 1 dataset

Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap

ESR1 1 dataset

ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 223 bp overlap

FOXA1 1 dataset

ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 55 bp overlap

HNF1A 1 dataset

ChIP NY15 GSE108150.HNF1A.NY15 293 bp overlap

HNF1B 1 dataset

ChIP PDAC GSE64557.HNF1B.PDAC 237 bp overlap

HNF4A 2 datasets

ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 164 bp overlap

ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 108 bp overlap

HOXC13 1 dataset

Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap

KLF4 1 dataset

ChIP PDAC GSE64557.KLF4.PDAC 109 bp overlap

KLF6 1 dataset

ChIP PDAC GSE64557.KLF6.PDAC 313 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 269 bp overlap

NCOR1 1 dataset

ChIP LS180 GSE39277.NCOR1.LS180 195 bp overlap

NFATC3 1 dataset

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

NR6A1 1 dataset

Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap

Nfatc1 1 dataset

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

PGR 1 dataset

Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap

PHIP 2 datasets

ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 236 bp overlap

ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 101 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD21 1 dataset

ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.RAD21.HCT-116_RAD21-mAC_500uM_auxin 186 bp overlap

RORA 1 dataset

Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 313 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 313 bp overlap

SMARCA4 3 datasets

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 93 bp overlap

ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 53 bp overlap

ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 102 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 176 bp overlap

SUPT5H 1 dataset

ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 270 bp overlap

TCF7L2 1 dataset

ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 134 bp overlap

TEAD4 2 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 86 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 86 bp overlap

TRIM28 2 datasets

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 213 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 190 bp overlap

ZIM3 1 dataset

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

Genome Browser