chr4 : 135,360,972 – 135,361,612

640 bp 52 TFs 0 linked genes

This 640 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

52 transcription factors

BCL6 2 datasets

Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap

Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap

CTCF 2 datasets

Motif DE_48h DE_48h-CTCF_MA1930.2 33 bp overlap

Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 132 bp overlap

ERF::SREBF2 1 dataset

Motif DE_60h DE_60h-ERFSREBF2_MA1939.2 16 bp overlap

ETV2::DRGX 2 datasets

Motif DE_48h DE_48h-ETV2DRGX_MA1940.2 12 bp overlap

Motif DE_60h DE_60h-ETV2DRGX_MA1940.2 12 bp overlap

FOSL1::JUND 1 dataset

Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 510 bp overlap

ChIP DE DE-FOXA2-2 537 bp overlap

FOXG1 1 dataset

Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap

FOXN3 1 dataset

Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap

Foxl2 1 dataset

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

GATA1::TAL1 2 datasets

Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 640 bp overlap

ChIP DE DE-GATA4-2 602 bp overlap

ChIP foregut GSE117136.GATA4.foregut 586 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 541 bp overlap

ChIP DE DE-GATA6-2 583 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 621 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 444 bp overlap

ChIP foregut GSE117136.GATA6.foregut 386 bp overlap

Gata3 2 datasets

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HOXC6 1 dataset

ChIP 22Rv1 GSE129951.HOXC6.22Rv1 71 bp overlap

Hmga1 1 dataset

Motif DE_60h DE_60h-Hmga1_MA2124.1 8 bp overlap

LIN54 1 dataset

Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap

NFATC3 2 datasets

Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

NKX2-3 2 datasets

Motif DE_48h DE_48h-NKX2-3_MA0672.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-3_MA0672.2 8 bp overlap

NKX2-4 2 datasets

Motif DE_48h DE_48h-NKX2-4_MA2003.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap

NKX2-8 2 datasets

Motif DE_48h DE_48h-NKX2-8_MA0673.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-8_MA0673.2 8 bp overlap

Nfatc1 2 datasets

Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Nkx2-1 2 datasets

Motif DE_48h DE_48h-Nkx2-1_MA1994.2 7 bp overlap

Motif DE_60h DE_60h-Nkx2-1_MA1994.2 7 bp overlap

PHOX2B 1 dataset

Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 477 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 254 bp overlap

SOX12 2 datasets

Motif DE_48h DE_48h-SOX12_MA1561.2 10 bp overlap

Motif DE_60h DE_60h-SOX12_MA1561.2 10 bp overlap

SOX13 2 datasets

Motif DE_48h DE_48h-SOX13_MA1120.2 7 bp overlap

Motif DE_60h DE_60h-SOX13_MA1120.2 7 bp overlap

SOX14 2 datasets

Motif DE_48h DE_48h-SOX14_MA1562.2 9 bp overlap

Motif DE_60h DE_60h-SOX14_MA1562.2 9 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 283 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 341 bp overlap

SOX2 2 datasets

Motif DE_48h DE_48h-SOX2_MA0143.5 7 bp overlap

Motif DE_60h DE_60h-SOX2_MA0143.5 7 bp overlap

SOX4 2 datasets

Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap

Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap

SOX8 2 datasets

Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap

Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap

SOX9 2 datasets

Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap

Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap

Sox11 2 datasets

Motif DE_48h DE_48h-Sox11_MA0869.3 8 bp overlap

Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap

Sox17 2 datasets

Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap

Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap

Sox3 2 datasets

Motif DE_48h DE_48h-Sox3_MA0514.3 7 bp overlap

Motif DE_60h DE_60h-Sox3_MA0514.3 7 bp overlap

Sox5 2 datasets

Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap

Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap

Sox6 2 datasets

Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

Sox7 2 datasets

Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

Stat6 1 dataset

Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 184 bp overlap

TCF7L2 1 dataset

ChIP HEK293 ENCFF513JQN 505 bp overlap

TRPS1 2 datasets

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB24 2 datasets

Motif DE_48h DE_48h-ZBTB24_MA2330.1 10 bp overlap

Motif DE_60h DE_60h-ZBTB24_MA2330.1 10 bp overlap

ZNF680 1 dataset

Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap

ZNF768 2 datasets

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap

Zfp335 1 dataset

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap