chr4 : 116,829,267 116,829,654
387 bp 28 TFs 0 linked genes
This 387 bp open chromatin element has no linked target genes and is bound by 28 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:116,824,267 – 116,834,654
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BRD4 1 dataset
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 303 bp overlap
CTCF 1 dataset
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 123 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 375 bp overlap
ChIP BLaER1 ENCFF262VBH 258 bp overlap
ChIP BLaER1 ENCFF364PUR 360 bp overlap
ESR1 2 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 115 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 124 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_HOTTIP-KO GSE114981.KMT2A.MOLM-13_HOTTIP-KO 187 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NFE2L2 1 dataset
ChIP A-375_A771726 GSE57431.NFE2L2.A-375_A771726 149 bp overlap
NFKB1 1 dataset
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
NFKB2 1 dataset
Motif DE_12h DE_12h-NFKB2_MA0778.2 11 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
NFYC 1 dataset
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 110 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 163 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap