chr4 : 112,282,506 112,282,703
197 bp 23 TFs 2 linked genes
This 197 bp open chromatin element is linked to ALPK1 and TIFA and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ALPK1 2.8 kb Proximal Proximity
TIFA 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:112,277,506 – 112,287,703
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 197 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 105 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 197 bp overlap
CTCF 8 datasets
ChIP GM04604 GSE148179.CTCF.GM04604 180 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 186 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 146 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 125 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 171 bp overlap
ChIP GM12873 ENCFF711LOS 176 bp overlap
ChIP GM12878 ENCFF485TGR 185 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 119 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 197 bp overlap
ESR1 5 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 186 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 158 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 186 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 172 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 197 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 197 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 197 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 197 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 197 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 69 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 80 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 197 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 197 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 197 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 165 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 197 bp overlap
SETDB1 1 dataset
ChIP HEK293 ENCFF676PLV 171 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 159 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 141 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 197 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 197 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 197 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 197 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 197 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 197 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 197 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 197 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 73 bp overlap
ZKSCAN5 1 dataset
ChIP HepG2 ENCFF579HCQ 197 bp overlap
ZNF687 1 dataset
ChIP GM12878 ENCFF233SGE 56 bp overlap