chr4 : 38,701,927 38,702,115
188 bp 28 TFs 0 linked genes
This 188 bp open chromatin element has no linked target genes and is bound by 28 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:38,696,927 – 38,707,115
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
AGO2 1 dataset
ChIP HepG2 ENCFF252VFI 177 bp overlap
ARID2 3 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 61 bp overlap
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 188 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 188 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 188 bp overlap
CTCF 1 dataset
ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 120 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 153 bp overlap
GATA4 1 dataset
ChIP A-549 GSE85002.GATA4.A-549 134 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 181 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 71 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 136 bp overlap
JUND 1 dataset
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 188 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 188 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 151 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 188 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 90 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 188 bp overlap
POLR2A 7 datasets
ChIP HCT116 ENCFF508RDJ 104 bp overlap
ChIP HepG2 ENCFF252NAR 188 bp overlap
ChIP MCF-7 ENCFF164XWP 188 bp overlap
ChIP sigmoid colon ENCFF725QFT 159 bp overlap
ChIP sigmoid colon ENCFF725QFT 188 bp overlap
ChIP transverse colon ENCFF098HBD 188 bp overlap
ChIP transverse colon ENCFF607LKE 101 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF292RVQ 148 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 58 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 168 bp overlap
SMAD3 1 dataset
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 188 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 188 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 80 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 188 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 137 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 188 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 69 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 188 bp overlap
SUPT5H 3 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 188 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 138 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 179 bp overlap
TCF7L2 2 datasets
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 81 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 63 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 76 bp overlap