chr3 : 156,910,229 156,910,570
341 bp 29 TFs 0 linked genes
This 341 bp open chromatin element has no linked target genes and is bound by 29 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:156,905,229 – 156,915,570
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_1d GSE90550.AHR.MCF-7_TCDD_1d 71 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 211 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 235 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
GATA6 1 dataset
ChIP HUG1N GSE51936.GATA6.HUG1N 109 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 73 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 269 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 170 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 305 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 341 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 138 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 341 bp overlap
SOX15 1 dataset
Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 219 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 270 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
TBX19 1 dataset
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 144 bp overlap
TP63 13 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 217 bp overlap
ChIP HCC95 GSE46837.TP63.HCC95 50 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 74 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 215 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 84 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 113 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 112 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 122 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 129 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 114 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 114 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 102 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 61 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap