chr3 : 115,667,596 115,667,957
361 bp 18 TFs 1 linked gene
This 361 bp open chromatin element is linked to ENSG00000241596 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000241596 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:115,662,596 – 115,672,957
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 209 bp overlap
BRD4 1 dataset
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 70 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 148 bp overlap
CEBPB 1 dataset
ChIP monocyte GSE31621.CEBPB.monocyte 103 bp overlap
CTCF 65 datasets
ChIP AG10803 ENCFF549AQK 257 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 251 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 184 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 309 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 168 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 356 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 99 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 359 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 185 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 256 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 175 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 315 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 181 bp overlap
ChIP GM12873 ENCFF711LOS 216 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 146 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 361 bp overlap
ChIP GM23338 ENCFF772DML 129 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 221 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 66 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 111 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 361 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 281 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 154 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 361 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 233 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 58 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 358 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 157 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 144 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 144 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 258 bp overlap
ChIP ascending-aorta ENCSR555DCD.CTCF.ascending-aorta 191 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 238 bp overlap
ChIP chondrocyte ENCFF134ORZ 164 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 264 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 345 bp overlap
ChIP endodermal cell ENCFF471YCZ 361 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 180 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 156 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 245 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 226 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 210 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 116 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 133 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 169 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 124 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 280 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 361 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 89 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 124 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 102 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 246 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 181 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 266 bp overlap
ChIP neural progenitor cell ENCFF581WPG 324 bp overlap
ChIP neural progenitor cell ENCFF581WPG 361 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 207 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 187 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 214 bp overlap
ChIP right atrium auricular region ENCFF696NTN 300 bp overlap
ChIP tibial-artery ENCSR079YAP.CTCF.tibial-artery 235 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 361 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 249 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 240 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 168 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 210 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 112 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 165 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 170 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 170 bp overlap
NR3C1 3 datasets
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 104 bp overlap
ChIP U2OS_siBRMsiHic5 GSE109383.NR3C1.U2OS_siBRMsiHic5 67 bp overlap
ChIP U2OS_siHic5siNS GSE109383.NR3C1.U2OS_siHic5siNS 121 bp overlap
RAD21 4 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 150 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 91 bp overlap
ChIP HCT116 ENCFF568PEO 143 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 145 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 59 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 234 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 68 bp overlap