Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

36 transcription factors

BRD4 4 datasets

ChIP CHL-1 GSE95585.BRD4.CHL-1 295 bp overlap

ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 275 bp overlap

ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 311 bp overlap

ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 198 bp overlap

CDX1 1 dataset

Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap

CDX2 3 datasets

Motif DE_36h DE_36h-CDX2_MA0465.3 8 bp overlap

ChIP LS180 GSE31939.CDX2.LS180 137 bp overlap

ChIP LS180_125 GSE31939.CDX2.LS180_125 148 bp overlap

CDX4 1 dataset

Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap

ERG 1 dataset

ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 162 bp overlap

EZH2 2 datasets

ChIP A-1847 GSE95643.EZH2.A-1847 281 bp overlap

ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 345 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 264 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 346 bp overlap

ChIP DE DE-FOXA2-2 346 bp overlap

FOXD3 1 dataset

Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 346 bp overlap

ChIP DE DE-GATA4-2 346 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 329 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 346 bp overlap

ChIP DE DE-GATA6-2 346 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 337 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 346 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 346 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 346 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 346 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 346 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 346 bp overlap

ChIP foregut GSE117136.GATA6.foregut 261 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 288 bp overlap

HOXA10 1 dataset

Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap

HOXB13 1 dataset

Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap

HOXD9 1 dataset

Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap

Hmga1 1 dataset

Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap

Hoxa13 1 dataset

Motif DE_36h DE_36h-Hoxa13_MA0650.4 8 bp overlap

Hoxd13 1 dataset

Motif DE_36h DE_36h-Hoxd13_MA0909.4 7 bp overlap

IRF2 1 dataset

Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap

IRF7 1 dataset

Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap

Irf1 1 dataset

Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap

Mecom 1 dataset

Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 346 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 272 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 346 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 307 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 297 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap

PRDM15 1 dataset

ChIP WTC11 ENCFF108TMF 322 bp overlap

RELB 1 dataset

ChIP GM12878 ENCSR387QUV.RELB.GM12878 323 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 311 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 320 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 295 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 241 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 261 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 289 bp overlap

STAT1::STAT2 1 dataset

Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap

Sox6 1 dataset

Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap

Stat2 1 dataset

Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap

THRA 1 dataset

Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap

Thap11 1 dataset

Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap

ZNF558 1 dataset

Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap

Zfp809 1 dataset

Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap

Genome Browser