Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

30 transcription factors

CREBBP 1 dataset

ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 304 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 274 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 330 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 360 bp overlap

CTCF 3 datasets

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 289 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 360 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 341 bp overlap

DDX5 1 dataset

ChIP NTERA2 GSE58641.DDX5.NTERA2 278 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 290 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 233 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-1 233 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 251 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 350 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 360 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 360 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 360 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 360 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 360 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 197 bp overlap

KDM1A 1 dataset

ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 147 bp overlap

MEF2D 2 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 263 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 308 bp overlap

NANOG 7 datasets

ChIP GM23338 ENCFF065NZG 309 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 162 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 325 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 145 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 188 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 244 bp overlap

ChIP hESC GSE18292.NANOG.hESC 116 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 331 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 282 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 360 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 360 bp overlap

PHOX2B 1 dataset

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 288 bp overlap

POU5F1 3 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 312 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 274 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 158 bp overlap

Prdm5 1 dataset

Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 360 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 233 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 360 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 246 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 253 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 188 bp overlap

SMAD4 1 dataset

ChIP HGrC1_EV GSE138496.SMAD4.HGrC1_EV 140 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 198 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 207 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 221 bp overlap

SPIB 1 dataset

ChIP OCI-Ly3_SHSPIB GSE56857.SPIB.OCI-Ly3_SHSPIB 144 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 190 bp overlap

TEAD4 2 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 360 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 360 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 193 bp overlap

ZNF157 1 dataset

Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap

Genome Browser